Protein ZmMYBR88
ZmMYBR88 is a protein in the MYB-related family.
Information
TF Name: ZmMYBR88
Species: Maize
TF Family: MYB-related
Gene Name(Synonym): MYBR88
Uniprot ID: A0A1D6PDQ1
Subgenome: 2

Protein ZmMYBR88

ZmMYBR88 is a protein in the MYB-related family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Overview of domains present in v5 transcripts
PF00249PF04433PF13921PF16495
Zm00001eb206120_T001

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d053687DAPseq no logo sequence fimo position
Zm00001d053687DAPseq no logo sequence fimo position
Zm00001d053687ChIPseq no logo sequence fimo position
Zm00001d053687PChIPseq no logo sequence fimo position

Interactions where ZmMYBR88 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmMYBR88 is the target  
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There are 81 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb206120_T001 from maize genome v5

Amino Acid Sequence
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MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDDNTDEPG
ANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLL
KEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS

MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDDNTDEPG
ANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLL
KEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS

MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDDNTDEPG
ANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLL
KEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS

MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDDNTDEPG
ANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLL
KEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS

MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDDNTDEPG
ANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLL
KEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS

MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDDNTDEPG
ANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLL
KEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS

MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDDNTDEPG
ANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLL
KEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS

MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDDNTDEPG
ANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLL
KEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF04433
PF00249
PF13921
PF16495
Hover here to show all domains

Nucleotide Sequence
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CACATGTCCCATCTTTTATCGAGTC...

GRMZM2G064328_T01 from maize genome v3


Related TFome: pUT5957

Amino Acid Sequence
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MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDDNTDEPG
ANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLL
KEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS

Nucleotide Sequence
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ATCTTTTATCGAGTCCAGGCCAGCG...

Zm00001d053687_T001 from maize genome v4

Amino Acid Sequence
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MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKVCILDLADISLCARCYVNNNYRPGL
SPANFKRVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDD
NTDEPGANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGL
SANVLLKEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQR
SPAVATECKGDEKPKPVASMS

Nucleotide Sequence
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ATCTTTTATCGAGTCCAGGCCAGCG...

Zm00001d053687_T002 from maize genome v4

Amino Acid Sequence
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MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKADISLCARCYVNNNYRPGLSPANFK
RVEITEDAKPDWTDKETLHLLEAVLHYGEDWKKVSEHVSSRSEKDCIARFIRLPFGEQFMGHKEDRMRFENTDDNTDEPG
ANVSKRLRLTPLADASNPIMAQVAFLSAIVGSDVASAAAQAAISAQSRVDLNDGEIETSINSIKQEESSHTNGLSANVLL
KEAAANARAQLEKERNSIEQSLSNIVDVQMKEIQDKICRFEQKEMLMEKERQQLHFLRDLLFTDQLAVMQHQQRSPAVAT
ECKGDEKPKPVASMS

Nucleotide Sequence
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ATCTTTTATCGAGTCCAGGCCAGCG...

Zm00001d053687_T003 from maize genome v4

Amino Acid Sequence
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MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSG

Nucleotide Sequence
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AGGCCAGCGACCGCGTTTCCGCCTT...

Zm00001d053687_T004 from maize genome v4

Amino Acid Sequence
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MATTATTMAPVTAPVATANLEPTPTPLHPRPAAPPHLRALSTLAPVKSEAPPTPSSSTAITAAAGAEDPSYIITVPSYSA
WFSFDSIHDTERRLLPEFFVGEAAAASGCRGPHAYKYYRDSLIRRFRARPGRRLTLTEARRGLVGDVGSVRRVFDFLEEW
GLINYGALPSGSKQAKEKREEAAQQSSLPFGAIAPRKLCTGCRTVCGLAYYACDKVCILDLV

Nucleotide Sequence
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GCCTTCTCCTCCCCTTCCACCTCCG...


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